Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM42Q8IWZ5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM42Q8IWZ5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 C18orf15-201ENST00000623680 2534 ntBASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 FDX1P1-201ENST00000449115 551 ntBASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 FAM197Y8-203ENST00000450145 560 ntBASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 TP73-AS1-207ENST00000624167 988 ntBASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM42Q8IWZ5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms