Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 DGCR5-201ENST00000399539 862 ntBASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC063926.2-201ENST00000623766 1308 ntBASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 LINC02199-201ENST00000506655 2702 ntBASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC074338.1-201ENST00000416825 156 ntBASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC123567.1-201ENST00000548294 1261 ntBASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 WASH4P-201ENST00000564273 1246 ntBASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCN4BQ8IWT1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCN4BQ8IWT1 MYCLP2-201ENST00000449268 967 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms