Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AC009090.5-201ENST00000624886 2285 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 WASH6P-202ENST00000359512 1437 ntBASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.86■□□□□ 0.13
NUDCD3Q8IVD9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AGAP7P-201ENST00000582299 2062 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AGAP14-201ENST00000624701 2060 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 GPX1P2-201ENST00000429271 606 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 HCG4P8-203ENST00000443049 980 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PRELID1P1-202ENST00000567272 903 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AL078644.1-201ENST00000609881 752 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 AC073439.1-201ENST00000624121 1774 ntBASIC15.85■□□□□ 0.13
NUDCD3Q8IVD9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms