Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNGA4Q8IV77 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AL645939.2-201ENST00000427340 991 ntBASIC17.31■□□□□ 0.36
CNGA4Q8IV77 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC098831.1-202ENST00000438821 336 ntBASIC17.31■□□□□ 0.36
CNGA4Q8IV77 UNC93B7-201ENST00000509439 705 ntBASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC024267.1-201ENST00000582320 895 ntBASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AL161645.1-201ENST00000622716 1255 ntBASIC17.31■□□□□ 0.36
CNGA4Q8IV77 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
CNGA4Q8IV77 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AC023908.3-201ENST00000564211 3047 ntBASIC17.3■□□□□ 0.36
CNGA4Q8IV77 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 EMBP1-201ENST00000458200 901 ntBASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 MROH4P-201ENST00000431302 1578 ntBASIC17.3■□□□□ 0.36
CNGA4Q8IV77 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNGA4Q8IV77 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms