Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 AC105020.1-201ENST00000435356 2205 ntBASIC19.61■□□□□ 0.73
COL23A1Q86Y22 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL23A1Q86Y22 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 DPM3-202ENST00000368399 517 ntBASIC19.6■□□□□ 0.73
COL23A1Q86Y22 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC005740.2-201ENST00000511085 419 ntBASIC19.6■□□□□ 0.73
COL23A1Q86Y22 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC073413.1-201ENST00000603927 732 ntBASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AP001002.3-201ENST00000623482 206 ntBASIC19.6■□□□□ 0.73
COL23A1Q86Y22 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 AC078925.2-201ENST00000624013 1973 ntBASIC19.6■□□□□ 0.73
COL23A1Q86Y22 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL23A1Q86Y22 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 AC100850.1-201ENST00000506768 649 ntBASIC19.59■□□□□ 0.73
COL23A1Q86Y22 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 AC073352.2-201ENST00000609385 439 ntBASIC19.59■□□□□ 0.73
COL23A1Q86Y22 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL23A1Q86Y22 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms