Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AC026410.1-201ENST00000507366 1101 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 MIR6842-201ENST00000612539 65 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 RNU1-114P-201ENST00000365297 166 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 KRT18P25-201ENST00000508931 1278 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AL160314.3-201ENST00000556041 767 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC087045.2-201ENST00000606279 1003 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 DPM3-202ENST00000368399 517 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AC078991.1-201ENST00000437297 610 ntBASIC13.09□□□□□ -0.31
CSMD2Q7Z408 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD2Q7Z408 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.08□□□□□ -0.31
CSMD2Q7Z408 AP001527.2-201ENST00000614441 631 ntBASIC13.08□□□□□ -0.31
CSMD2Q7Z408 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD2Q7Z408 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms