Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 AC007389.4-201ENST00000454674 793 ntBASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 KRT18P43-201ENST00000469825 1281 ntBASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
UBE3BQ7Z3V4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 GPR53P-205ENST00000457298 1084 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 VDAC1P7-201ENST00000462417 847 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AC008735.3-201ENST00000596646 500 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AC010319.3-201ENST00000597028 470 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AL049840.4-201ENST00000602422 811 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AL162274.1-201ENST00000617191 1098 ntBASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE3BQ7Z3V4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 INTS4P2-202ENST00000614726 2019 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AC112492.5-201ENST00000421897 457 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AC000095.1-201ENST00000603208 874 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AC133539.2-201ENST00000604757 467 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AL008721.1-201ENST00000609964 604 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.68■□□□□ 0.74
UBE3BQ7Z3V4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms