Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NHLRC1Q6VVB1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NHLRC1Q6VVB1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NHLRC1Q6VVB1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AL512356.2-201ENST00000546955 174 ntBASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AC026150.2-201ENST00000564693 1156 ntBASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 AC027612.4-201ENST00000605371 583 ntBASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NHLRC1Q6VVB1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 KRT18P32-201ENST00000424695 1287 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AC243562.2-201ENST00000561247 970 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AC018529.1-201ENST00000613063 361 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 AC023511.2-201ENST00000618803 211 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NHLRC1Q6VVB1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms