Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 LINC02447-202ENST00000501888 2146 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 NDUFAB1P1-201ENST00000404262 460 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 COX5BP1-201ENST00000507622 393 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 OR10B1P-201ENST00000601666 907 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 PTPA-218ENST00000435132 618 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 AC092364.2-201ENST00000596710 2692 ntBASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 PCDHA12-202ENST00000613593 2588 ntBASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CDC42BPAQ5VT25 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CDC42BPAQ5VT25 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CDC42BPAQ5VT25 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AC126915.1-201ENST00000522847 1038 ntBASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 RN7SL190P-201ENST00000582519 257 ntBASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AL645939.5-201ENST00000606834 243 ntBASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 SPTLC1P5-201ENST00000450718 252 ntBASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 DUX4L47-201ENST00000566374 394 ntBASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 NAT9-222ENST00000583476 583 ntTSL 3 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.45■■□□□ 1.34
CDC42BPAQ5VT25 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 AL136309.1-201ENST00000403917 691 ntBASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42BPAQ5VT25 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDC42BPAQ5VT25 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDC42BPAQ5VT25 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CDC42BPAQ5VT25 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDC42BPAQ5VT25 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms