Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AC232323.1-201ENST00000540724 2099 ntBASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 REXO1L5P-201ENST00000622260 2098 ntBASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AL390755.1-201ENST00000623716 2027 ntBASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AL009183.1-201ENST00000603760 355 ntBASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 AC127383.1-201ENST00000444697 1800 ntBASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00242Q5T6M2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 LINC00528-201ENST00000600723 2160 ntBASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 LINC00552-201ENST00000625151 2579 ntBASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 AP002414.3-201ENST00000589352 1468 ntBASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 PRSS29P-201ENST00000440800 595 ntBASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 RNPS1P1-201ENST00000507437 918 ntBASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms