Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AL359711.2-201ENST00000563105 872 ntBASIC16.78■□□□□ 0.28
VARS2Q5ST30 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AL391262.2-201ENST00000622466 494 ntBASIC16.78■□□□□ 0.28
VARS2Q5ST30 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.78■□□□□ 0.28
VARS2Q5ST30 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 KRT8P22-201ENST00000562317 1415 ntBASIC16.78■□□□□ 0.28
VARS2Q5ST30 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARS2Q5ST30 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AL035696.2-201ENST00000407941 709 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AL162726.2-201ENST00000438986 1017 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC015936.2-201ENST00000593177 259 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms