Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.2■□□□□ 0.5
USH1GQ495M9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.2■□□□□ 0.5
USH1GQ495M9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
USH1GQ495M9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.2■□□□□ 0.5
USH1GQ495M9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.2■□□□□ 0.5
USH1GQ495M9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 SLED1-202ENST00000512051 380 ntBASIC18.2■□□□□ 0.5
USH1GQ495M9 AC132938.2-201ENST00000579188 680 ntBASIC18.2■□□□□ 0.5
USH1GQ495M9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.2■□□□□ 0.5
USH1GQ495M9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.2■□□□□ 0.5
USH1GQ495M9 AL591163.1-201ENST00000641757 987 ntBASIC18.2■□□□□ 0.5
USH1GQ495M9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.2■□□□□ 0.5
USH1GQ495M9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.2■□□□□ 0.5
USH1GQ495M9 CDC14C-201ENST00000428251 1719 ntBASIC18.2■□□□□ 0.5
USH1GQ495M9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
USH1GQ495M9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USH1GQ495M9 AC011477.6-201ENST00000604980 1927 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USH1GQ495M9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
USH1GQ495M9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
USH1GQ495M9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 LINC02447-202ENST00000501888 2146 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
USH1GQ495M9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
USH1GQ495M9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 RRP7BP-205ENST00000566851 833 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
USH1GQ495M9 AL391069.4-201ENST00000609583 481 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.19■□□□□ 0.5
USH1GQ495M9 IGHV3-72-202ENST00000621503 303 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 AC124067.4-201ENST00000519691 2379 ntBASIC18.19■□□□□ 0.5
USH1GQ495M9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USH1GQ495M9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.19■□□□□ 0.5
USH1GQ495M9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USH1GQ495M9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USH1GQ495M9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.18■□□□□ 0.5
USH1GQ495M9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USH1GQ495M9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 RN7SL399P-201ENST00000471648 279 ntBASIC18.18■□□□□ 0.5
USH1GQ495M9 AC104596.2-201ENST00000512793 793 ntBASIC18.18■□□□□ 0.5
USH1GQ495M9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.18■□□□□ 0.5
USH1GQ495M9 AC036164.1-201ENST00000570544 333 ntBASIC18.18■□□□□ 0.5
USH1GQ495M9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.18■□□□□ 0.5
USH1GQ495M9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USH1GQ495M9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.18■□□□□ 0.5
USH1GQ495M9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USH1GQ495M9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.18■□□□□ 0.5
USH1GQ495M9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms