Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.45■□□□□ 0.38
KCNA1Q09470 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KCNA1Q09470 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNA1Q09470 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KCNA1Q09470 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KCNA1Q09470 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNA1Q09470 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNA1Q09470 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 AC009407.1-201ENST00000568958 598 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 AC025048.3-201ENST00000590609 569 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 AC005702.4-201ENST00000618393 416 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNA1Q09470 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNA1Q09470 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
KCNA1Q09470 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNA1Q09470 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 AC087499.5-201ENST00000452760 1342 ntBASIC17.44■□□□□ 0.38
KCNA1Q09470 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNA1Q09470 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNA1Q09470 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNA1Q09470 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
KCNA1Q09470 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.43■□□□□ 0.38
KCNA1Q09470 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC241585.1-201ENST00000433527 519 ntBASIC17.43■□□□□ 0.38
KCNA1Q09470 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.43■□□□□ 0.38
KCNA1Q09470 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC044860.1-202ENST00000559481 777 ntBASIC17.43■□□□□ 0.38
KCNA1Q09470 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms