Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HMGCS1Q01581 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HMGCS1Q01581 AC023157.3-201ENST00000619086 2088 ntBASIC15.36■□□□□ 0.05
HMGCS1Q01581 FLJ16779-201ENST00000612722 7638 ntBASIC15.36■□□□□ 0.05
HMGCS1Q01581 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGCS1Q01581 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HMGCS1Q01581 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AL109954.1-202ENST00000564051 2148 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC068587.6-202ENST00000641839 5619 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 HLA-H-201ENST00000383620 1096 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC004987.2-201ENST00000395959 1148 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 BX842568.4-201ENST00000421222 227 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 HTR5BP-201ENST00000430851 1154 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 SLC25A39P2-201ENST00000537614 270 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 MIR4313-201ENST00000580760 101 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 MTDHP5-201ENST00000598980 586 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC006486.2-201ENST00000624246 2199 ntBASIC15.35■□□□□ 0.05
HMGCS1Q01581 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCS1Q01581 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCS1Q01581 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TNRC18P2-201ENST00000417666 2714 ntBASIC15.34■□□□□ 0.05
HMGCS1Q01581 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AC069335.1-201ENST00000489972 472 ntBASIC15.34■□□□□ 0.05
HMGCS1Q01581 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms