Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
HSPG2P98160 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 AL133373.2-201ENST00000623187 2828 ntBASIC9.56□□□□□ -0.88
HSPG2P98160 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 AC239868.1-201ENST00000369385 493 ntBASIC9.56□□□□□ -0.88
HSPG2P98160 AL627231.1-201ENST00000394467 1125 ntBASIC9.56□□□□□ -0.88
HSPG2P98160 LINC00634-202ENST00000505157 222 ntBASIC9.56□□□□□ -0.88
HSPG2P98160 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC9.56□□□□□ -0.88
HSPG2P98160 LINC00431-202ENST00000636375 159 ntBASIC9.56□□□□□ -0.88
HSPG2P98160 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
HSPG2P98160 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
HSPG2P98160 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 AL157791.1-201ENST00000553667 1699 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC9.55□□□□□ -0.88
HSPG2P98160 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 AC021723.1-201ENST00000486306 515 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 MIR3677-201ENST00000578964 60 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 AL157813.1-201ENST00000612996 587 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 MVK-214ENST00000629016 1591 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 HNRNPA1P41-201ENST00000397777 928 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 PSMD4P1-201ENST00000433951 1109 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 RN7SL163P-201ENST00000583100 276 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 AP000356.3-201ENST00000382243 753 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 RN7SL258P-201ENST00000478664 300 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 AC084781.1-201ENST00000613737 656 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 AL645728.2-202ENST00000641679 227 ntBASIC9.55□□□□□ -0.88
HSPG2P98160 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
HSPG2P98160 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC9.55□□□□□ -0.88
HSPG2P98160 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HSPG2P98160 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
HSPG2P98160 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC9.54□□□□□ -0.88
HSPG2P98160 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC9.54□□□□□ -0.88
HSPG2P98160 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC9.54□□□□□ -0.88
HSPG2P98160 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HSPG2P98160 GNE-204ENST00000539208 2190 ntTSL 2 BASIC9.54□□□□□ -0.88
HSPG2P98160 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms