Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 PCDHA3-202ENST00000532566 4594 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 OR2I1P-210ENST00000642037 4691 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 AC041040.2-201ENST00000622926 2899 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
CXCR4P61073 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CXCR4P61073 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 FAM8A3P-201ENST00000427218 844 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 MIR3909-201ENST00000579518 119 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCR4P61073 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 MIR1199-201ENST00000621445 119 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CXCR4P61073 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCR4P61073 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CXCR4P61073 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.53□□□□□ -0.08
CXCR4P61073 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CXCR4P61073 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.52□□□□□ -0.08
CXCR4P61073 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.52□□□□□ -0.08
CXCR4P61073 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CXCR4P61073 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.52□□□□□ -0.08
CXCR4P61073 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CXCR4P61073 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CXCR4P61073 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CXCR4P61073 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CXCR4P61073 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CXCR4P61073 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.52□□□□□ -0.08
CXCR4P61073 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CXCR4P61073 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CXCR4P61073 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 AL645939.2-201ENST00000427340 991 ntBASIC14.52□□□□□ -0.09
CXCR4P61073 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.52□□□□□ -0.09
CXCR4P61073 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.52□□□□□ -0.09
CXCR4P61073 IGHV3-65-201ENST00000523210 341 ntBASIC14.52□□□□□ -0.09
CXCR4P61073 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.52□□□□□ -0.09
CXCR4P61073 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.52□□□□□ -0.09
CXCR4P61073 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.52□□□□□ -0.09
CXCR4P61073 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms