Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VSX2P58304 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
VSX2P58304 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
VSX2P58304 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VSX2P58304 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.25■□□□□ 0.03
VSX2P58304 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.25■□□□□ 0.03
VSX2P58304 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VSX2P58304 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 AC236430.1-201ENST00000402231 743 ntBASIC15.25■□□□□ 0.03
VSX2P58304 HIST3H2BA-201ENST00000436555 524 ntBASIC15.25■□□□□ 0.03
VSX2P58304 AC002472.2-201ENST00000442739 958 ntBASIC15.25■□□□□ 0.03
VSX2P58304 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.25■□□□□ 0.03
VSX2P58304 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.25■□□□□ 0.03
VSX2P58304 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.25■□□□□ 0.03
VSX2P58304 MIR3197-201ENST00000582241 73 ntBASIC15.25■□□□□ 0.03
VSX2P58304 RN7SL204P-201ENST00000582831 262 ntBASIC15.25■□□□□ 0.03
VSX2P58304 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.25■□□□□ 0.03
VSX2P58304 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
VSX2P58304 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.25■□□□□ 0.03
VSX2P58304 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
VSX2P58304 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VSX2P58304 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 REXO1L1P-202ENST00000608646 1974 ntBASIC15.24■□□□□ 0.03
VSX2P58304 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 MIR661-201ENST00000384842 89 ntBASIC15.24■□□□□ 0.03
VSX2P58304 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.24■□□□□ 0.03
VSX2P58304 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 AC135586.1-201ENST00000539323 574 ntBASIC15.24■□□□□ 0.03
VSX2P58304 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.24■□□□□ 0.03
VSX2P58304 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
VSX2P58304 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.24■□□□□ 0.03
VSX2P58304 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.24■□□□□ 0.03
VSX2P58304 LINC02560-201ENST00000596379 459 ntBASIC15.24■□□□□ 0.03
VSX2P58304 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.24■□□□□ 0.03
VSX2P58304 AL109936.8-201ENST00000641772 604 ntBASIC15.24■□□□□ 0.03
VSX2P58304 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VSX2P58304 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.24■□□□□ 0.03
VSX2P58304 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.24■□□□□ 0.03
VSX2P58304 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms