Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 AC142381.1-201ENST00000426099 345 ntBASIC15.6■□□□□ 0.09
CDH13P55290 FAM58CP-201ENST00000435741 640 ntBASIC15.6■□□□□ 0.09
CDH13P55290 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH13P55290 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
CDH13P55290 AC243562.2-201ENST00000561247 970 ntBASIC15.6■□□□□ 0.09
CDH13P55290 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH13P55290 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 AC008267.7-201ENST00000624570 1194 ntBASIC15.6■□□□□ 0.09
CDH13P55290 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
CDH13P55290 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.6■□□□□ 0.09
CDH13P55290 REXO1L1P-202ENST00000608646 1974 ntBASIC15.6■□□□□ 0.09
CDH13P55290 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 AL136982.4-201ENST00000437689 1740 ntBASIC15.6■□□□□ 0.09
CDH13P55290 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDH13P55290 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDH13P55290 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH13P55290 AC092902.6-201ENST00000641783 218 ntBASIC15.59■□□□□ 0.09
CDH13P55290 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 AC006058.4-201ENST00000624016 1670 ntBASIC15.59■□□□□ 0.09
CDH13P55290 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH13P55290 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH13P55290 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH13P55290 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH13P55290 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.58■□□□□ 0.09
CDH13P55290 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CDH13P55290 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH13P55290 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms