Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA4P54764 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHA4P54764 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHA4P54764 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA4P54764 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHA4P54764 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHA4P54764 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
EPHA4P54764 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA4P54764 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.28■□□□□ 0.04
EPHA4P54764 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EPHA4P54764 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EPHA4P54764 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA4P54764 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.28■□□□□ 0.04
EPHA4P54764 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA4P54764 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHA4P54764 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EPHA4P54764 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA4P54764 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHA4P54764 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
EPHA4P54764 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
EPHA4P54764 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
EPHA4P54764 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHA4P54764 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHA4P54764 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
EPHA4P54764 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
EPHA4P54764 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA4P54764 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA4P54764 U91328.1-201ENST00000437528 223 ntBASIC15.27■□□□□ 0.04
EPHA4P54764 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.27■□□□□ 0.04
EPHA4P54764 GPR53P-205ENST00000457298 1084 ntBASIC15.27■□□□□ 0.04
EPHA4P54764 RN7SL837P-201ENST00000463010 287 ntBASIC15.27■□□□□ 0.04
EPHA4P54764 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.27■□□□□ 0.04
EPHA4P54764 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA4P54764 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.27■□□□□ 0.04
EPHA4P54764 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA4P54764 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.27■□□□□ 0.04
EPHA4P54764 AC106886.1-201ENST00000568660 600 ntBASIC15.27■□□□□ 0.04
EPHA4P54764 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
EPHA4P54764 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
EPHA4P54764 WFDC1-204ENST00000613603 549 ntBASIC15.27■□□□□ 0.04
EPHA4P54764 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.27■□□□□ 0.04
EPHA4P54764 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
EPHA4P54764 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
EPHA4P54764 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA4P54764 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.27■□□□□ 0.03
EPHA4P54764 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA4P54764 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
EPHA4P54764 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 1069.8 ms