Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC073389.1-201ENST00000595595 795 ntBASIC16.06■□□□□ 0.16
LIMK2P53671 AJ011932.1-201ENST00000621707 465 ntBASIC16.06■□□□□ 0.16
LIMK2P53671 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 MIR346-201ENST00000362234 95 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.05■□□□□ 0.16
LIMK2P53671 MIR943-201ENST00000401286 94 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC107890.1-201ENST00000422478 521 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC125807.1-201ENST00000483097 614 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 SLC25A39P2-201ENST00000537614 270 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.05■□□□□ 0.16
LIMK2P53671 AP000842.3-202ENST00000569238 1080 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LIMK2P53671 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC087481.3-201ENST00000602886 1894 ntBASIC16.05■□□□□ 0.16
LIMK2P53671 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK2P53671 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK2P53671 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK2P53671 AC006486.2-201ENST00000624246 2199 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK2P53671 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK2P53671 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 BASP1P1-201ENST00000430708 665 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK2P53671 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 ALG1L8P-201ENST00000533887 760 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.04■□□□□ 0.16
LIMK2P53671 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK2P53671 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 MIR4745-201ENST00000577608 62 ntBASIC16.04■□□□□ 0.16
LIMK2P53671 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK2P53671 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK2P53671 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK2P53671 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK2P53671 AL109954.1-202ENST00000564051 2148 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms