Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPT1AP50416 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPT1AP50416 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPT1AP50416 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPT1AP50416 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.47■□□□□ 0.39
CPT1AP50416 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPT1AP50416 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPT1AP50416 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPT1AP50416 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 CNN2P8-201ENST00000421872 913 ntBASIC17.46■□□□□ 0.39
CPT1AP50416 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 AC108725.1-201ENST00000495472 409 ntBASIC17.46■□□□□ 0.39
CPT1AP50416 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 AC023310.1-201ENST00000554836 735 ntBASIC17.46■□□□□ 0.39
CPT1AP50416 AL606495.2-201ENST00000605867 535 ntBASIC17.46■□□□□ 0.39
CPT1AP50416 AP005019.2-201ENST00000615104 511 ntBASIC17.46■□□□□ 0.39
CPT1AP50416 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.46■□□□□ 0.39
CPT1AP50416 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPT1AP50416 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPT1AP50416 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.38
CPT1AP50416 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CPT1AP50416 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.46■□□□□ 0.38
CPT1AP50416 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.46■□□□□ 0.38
CPT1AP50416 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.45■□□□□ 0.38
CPT1AP50416 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.45■□□□□ 0.38
CPT1AP50416 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.45■□□□□ 0.38
CPT1AP50416 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 AC025279.2-201ENST00000569730 653 ntBASIC17.45■□□□□ 0.38
CPT1AP50416 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.45■□□□□ 0.38
CPT1AP50416 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.45■□□□□ 0.38
CPT1AP50416 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.45■□□□□ 0.38
CPT1AP50416 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.45■□□□□ 0.38
CPT1AP50416 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.45■□□□□ 0.38
CPT1AP50416 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CPT1AP50416 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CPT1AP50416 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPT1AP50416 LTB4R2-202ENST00000528054 3092 ntBASIC17.44■□□□□ 0.38
CPT1AP50416 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.44■□□□□ 0.38
CPT1AP50416 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.44■□□□□ 0.38
CPT1AP50416 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.44■□□□□ 0.38
CPT1AP50416 RN7SL560P-201ENST00000577943 264 ntBASIC17.44■□□□□ 0.38
CPT1AP50416 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms