Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 AC133561.5-201ENST00000635547 218 ntBASIC12.64□□□□□ -0.39
CDC34P49427 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.63□□□□□ -0.39
CDC34P49427 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CDC34P49427 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.63□□□□□ -0.39
CDC34P49427 IGHV3-47-201ENST00000425060 335 ntBASIC12.63□□□□□ -0.39
CDC34P49427 DRAXINP1-201ENST00000437611 948 ntBASIC12.63□□□□□ -0.39
CDC34P49427 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.63□□□□□ -0.39
CDC34P49427 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.63□□□□□ -0.39
CDC34P49427 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 AC022616.7-201ENST00000525383 220 ntBASIC12.63□□□□□ -0.39
CDC34P49427 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.63□□□□□ -0.39
CDC34P49427 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
CDC34P49427 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.63□□□□□ -0.39
CDC34P49427 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CDC34P49427 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.63□□□□□ -0.39
CDC34P49427 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC34P49427 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CDC34P49427 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CDC34P49427 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC34P49427 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC34P49427 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC34P49427 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC34P49427 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms