Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DBET-201ENST00000630918 3363 ntBASIC17.02■□□□□ 0.32
SSR1P43307 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SSR1P43307 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSR1P43307 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.02■□□□□ 0.31
SSR1P43307 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSR1P43307 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSR1P43307 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SSR1P43307 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SSR1P43307 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.01■□□□□ 0.31
SSR1P43307 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SSR1P43307 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SSR1P43307 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
SSR1P43307 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSR1P43307 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.01■□□□□ 0.31
SSR1P43307 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
SSR1P43307 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SSR1P43307 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17■□□□□ 0.31
SSR1P43307 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17■□□□□ 0.31
SSR1P43307 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17■□□□□ 0.31
SSR1P43307 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SSR1P43307 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17■□□□□ 0.31
SSR1P43307 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17■□□□□ 0.31
SSR1P43307 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSR1P43307 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17■□□□□ 0.31
SSR1P43307 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
SSR1P43307 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17■□□□□ 0.31
SSR1P43307 HLA-DQB2-231ENST00000435145 2026 ntBASIC17■□□□□ 0.31
SSR1P43307 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17■□□□□ 0.31
SSR1P43307 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17■□□□□ 0.31
SSR1P43307 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 RARRES2P8-201ENST00000566335 367 ntBASIC17■□□□□ 0.31
SSR1P43307 AL138918.1-201ENST00000568306 659 ntBASIC17■□□□□ 0.31
SSR1P43307 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17■□□□□ 0.31
SSR1P43307 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSR1P43307 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSR1P43307 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17■□□□□ 0.31
SSR1P43307 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SSR1P43307 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17■□□□□ 0.31
SSR1P43307 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SSR1P43307 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17■□□□□ 0.31
SSR1P43307 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SSR1P43307 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSR1P43307 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSR1P43307 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SSR1P43307 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.99■□□□□ 0.31
SSR1P43307 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.99■□□□□ 0.31
SSR1P43307 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.99■□□□□ 0.31
SSR1P43307 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSR1P43307 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.99■□□□□ 0.31
SSR1P43307 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SSR1P43307 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SSR1P43307 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSR1P43307 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.99■□□□□ 0.31
SSR1P43307 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.99■□□□□ 0.31
SSR1P43307 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.99■□□□□ 0.31
SSR1P43307 FAM58CP-201ENST00000435741 640 ntBASIC16.99■□□□□ 0.31
SSR1P43307 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.99■□□□□ 0.31
SSR1P43307 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms