Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 AC092127.1-201ENST00000567093 3455 ntBASIC17.13■□□□□ 0.33
TNFSF9P41273 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
TNFSF9P41273 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFSF9P41273 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TNFSF9P41273 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 DFFBP1-201ENST00000433250 979 ntBASIC17.13■□□□□ 0.33
TNFSF9P41273 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFSF9P41273 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFSF9P41273 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.13■□□□□ 0.33
TNFSF9P41273 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TNFSF9P41273 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.13■□□□□ 0.33
TNFSF9P41273 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.13■□□□□ 0.33
TNFSF9P41273 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFSF9P41273 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFSF9P41273 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFSF9P41273 CLK3P2-201ENST00000427566 1453 ntBASIC17.12■□□□□ 0.33
TNFSF9P41273 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNFSF9P41273 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.12■□□□□ 0.33
TNFSF9P41273 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFSF9P41273 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFSF9P41273 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.12■□□□□ 0.33
TNFSF9P41273 WASH4P-201ENST00000564273 1246 ntBASIC17.12■□□□□ 0.33
TNFSF9P41273 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TNFSF9P41273 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TNFSF9P41273 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFSF9P41273 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFSF9P41273 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFSF9P41273 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFSF9P41273 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC132872.4-202ENST00000622924 2756 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 TOMM22P5-201ENST00000416399 439 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 AC098850.1-201ENST00000419919 790 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 AL353779.1-201ENST00000434793 351 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AP005018.1-201ENST00000525475 301 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC055876.2-201ENST00000531834 546 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.11■□□□□ 0.33
TNFSF9P41273 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFSF9P41273 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFSF9P41273 MIR8072-201ENST00000614241 80 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC007950.2-201ENST00000615045 2347 ntBASIC17.11■□□□□ 0.33
TNFSF9P41273 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFSF9P41273 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TNFSF9P41273 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF9P41273 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFSF9P41273 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TNFSF9P41273 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF9P41273 AC009090.5-201ENST00000624886 2285 ntBASIC17.1■□□□□ 0.33
TNFSF9P41273 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms