Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.81■□□□□ 0.28
CHKAP35790 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHKAP35790 AL589739.1-201ENST00000607720 493 ntBASIC16.81■□□□□ 0.28
CHKAP35790 SPDYE12P-201ENST00000618416 771 ntBASIC16.81■□□□□ 0.28
CHKAP35790 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 TNRC18P2-201ENST00000417666 2714 ntBASIC16.81■□□□□ 0.28
CHKAP35790 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHKAP35790 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKAP35790 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CHKAP35790 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
CHKAP35790 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHKAP35790 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHKAP35790 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.8■□□□□ 0.28
CHKAP35790 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.8■□□□□ 0.28
CHKAP35790 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.8■□□□□ 0.28
CHKAP35790 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.8■□□□□ 0.28
CHKAP35790 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.8■□□□□ 0.28
CHKAP35790 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.8■□□□□ 0.28
CHKAP35790 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHKAP35790 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CHKAP35790 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHKAP35790 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHKAP35790 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHKAP35790 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHKAP35790 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHKAP35790 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
CHKAP35790 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
CHKAP35790 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHKAP35790 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.79■□□□□ 0.28
CHKAP35790 TSPY16P-201ENST00000449843 468 ntBASIC16.79■□□□□ 0.28
CHKAP35790 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.79■□□□□ 0.28
CHKAP35790 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.79■□□□□ 0.28
CHKAP35790 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.79■□□□□ 0.28
CHKAP35790 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHKAP35790 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHKAP35790 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHKAP35790 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
CHKAP35790 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHKAP35790 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHKAP35790 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHKAP35790 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHKAP35790 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHKAP35790 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms