Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HOXC12P31275 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.15□□□□□ -0.14
HOXC12P31275 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXC12P31275 HLA-V-204ENST00000476601 1289 ntBASIC14.15□□□□□ -0.14
HOXC12P31275 IGHV3-71-201ENST00000523324 359 ntBASIC14.15□□□□□ -0.14
HOXC12P31275 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.15□□□□□ -0.14
HOXC12P31275 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 AC243562.2-201ENST00000561247 970 ntBASIC14.15□□□□□ -0.14
HOXC12P31275 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.15□□□□□ -0.14
HOXC12P31275 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXC12P31275 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.15□□□□□ -0.14
HOXC12P31275 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXC12P31275 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXC12P31275 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HOXC12P31275 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXC12P31275 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.15□□□□□ -0.15
HOXC12P31275 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
HOXC12P31275 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HOXC12P31275 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HOXC12P31275 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 AL122018.1-201ENST00000446607 2310 ntBASIC14.14□□□□□ -0.15
HOXC12P31275 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.14□□□□□ -0.15
HOXC12P31275 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.14□□□□□ -0.15
HOXC12P31275 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXC12P31275 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.14□□□□□ -0.15
HOXC12P31275 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXC12P31275 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 TP53TG3HP-202ENST00000569755 579 ntBASIC14.14□□□□□ -0.15
HOXC12P31275 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXC12P31275 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 SPDYE12P-201ENST00000618416 771 ntBASIC14.14□□□□□ -0.15
HOXC12P31275 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
HOXC12P31275 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXC12P31275 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXC12P31275 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms