Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 MIR574-201ENST00000385209 96 ntBASIC13.67□□□□□ -0.22
CCL1P22362 SPDYE17-201ENST00000412399 783 ntBASIC13.67□□□□□ -0.22
CCL1P22362 AL353705.2-201ENST00000428243 662 ntBASIC13.67□□□□□ -0.22
CCL1P22362 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL1P22362 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 BANF1P1-201ENST00000553684 263 ntBASIC13.67□□□□□ -0.22
CCL1P22362 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.67□□□□□ -0.22
CCL1P22362 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL1P22362 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCL1P22362 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL1P22362 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 LINC01101-201ENST00000622953 1884 ntBASIC13.66□□□□□ -0.22
CCL1P22362 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 FAM45BP-202ENST00000592932 1624 ntBASIC13.66□□□□□ -0.22
CCL1P22362 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 MIR940-201ENST00000401276 94 ntBASIC13.66□□□□□ -0.22
CCL1P22362 FO393414.2-201ENST00000405153 598 ntBASIC13.66□□□□□ -0.22
CCL1P22362 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL1P22362 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL1P22362 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL1P22362 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL1P22362 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL1P22362 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL1P22362 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCL1P22362 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL1P22362 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL1P22362 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL1P22362 AC148477.4-201ENST00000613430 1793 ntBASIC13.66□□□□□ -0.22
CCL1P22362 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms