Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CCL2P13500 KRT8P37-201ENST00000451609 1420 ntBASIC13.9□□□□□ -0.19
CCL2P13500 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCL2P13500 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.89□□□□□ -0.19
CCL2P13500 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CCL2P13500 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 AC097493.3-201ENST00000509725 367 ntBASIC13.89□□□□□ -0.19
CCL2P13500 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL2P13500 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.89□□□□□ -0.19
CCL2P13500 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.89□□□□□ -0.19
CCL2P13500 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 AC073592.8-201ENST00000624126 511 ntBASIC13.89□□□□□ -0.19
CCL2P13500 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CCL2P13500 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.89□□□□□ -0.19
CCL2P13500 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCL2P13500 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 CICP13-201ENST00000422015 2789 ntBASIC13.88□□□□□ -0.19
CCL2P13500 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL2P13500 AC092580.3-201ENST00000430932 139 ntBASIC13.88□□□□□ -0.19
CCL2P13500 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.88□□□□□ -0.19
CCL2P13500 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL2P13500 CYMP-203ENST00000474680 1263 ntBASIC13.88□□□□□ -0.19
CCL2P13500 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL2P13500 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL2P13500 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 AL390754.1-201ENST00000619088 582 ntBASIC13.88□□□□□ -0.19
CCL2P13500 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.88□□□□□ -0.19
CCL2P13500 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 AP005117.1-202ENST00000581724 1908 ntBASIC13.88□□□□□ -0.19
CCL2P13500 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.88□□□□□ -0.19
CCL2P13500 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCL2P13500 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL2P13500 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCL2P13500 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL2P13500 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCL2P13500 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL2P13500 AZGP1P1-201ENST00000411909 902 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms