Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.58■□□□□ 0.08
PCNAP12004 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.58■□□□□ 0.08
PCNAP12004 AC005829.1-201ENST00000570002 483 ntBASIC15.58■□□□□ 0.08
PCNAP12004 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.58■□□□□ 0.08
PCNAP12004 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCNAP12004 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PCNAP12004 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.58■□□□□ 0.08
PCNAP12004 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCNAP12004 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCNAP12004 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.57■□□□□ 0.08
PCNAP12004 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCNAP12004 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.57■□□□□ 0.08
PCNAP12004 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 AL592309.1-201ENST00000443127 649 ntBASIC15.57■□□□□ 0.08
PCNAP12004 AC245100.5-201ENST00000452108 331 ntBASIC15.57■□□□□ 0.08
PCNAP12004 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.57■□□□□ 0.08
PCNAP12004 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.57■□□□□ 0.08
PCNAP12004 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.57■□□□□ 0.08
PCNAP12004 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.57■□□□□ 0.08
PCNAP12004 AC024267.1-201ENST00000582320 895 ntBASIC15.57■□□□□ 0.08
PCNAP12004 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 AC010327.4-202ENST00000591484 748 ntBASIC15.57■□□□□ 0.08
PCNAP12004 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.57■□□□□ 0.08
PCNAP12004 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCNAP12004 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 FOXO1B-201ENST00000504678 1527 ntBASIC15.57■□□□□ 0.08
PCNAP12004 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCNAP12004 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCNAP12004 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 ELL2P1-201ENST00000413990 1906 ntBASIC15.56■□□□□ 0.08
PCNAP12004 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
PCNAP12004 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.56■□□□□ 0.08
PCNAP12004 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms