Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CD28P10747 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 RN7SL837P-201ENST00000463010 287 ntBASIC12.45□□□□□ -0.42
CD28P10747 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.45□□□□□ -0.42
CD28P10747 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.45□□□□□ -0.42
CD28P10747 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.45□□□□□ -0.42
CD28P10747 AC092337.1-201ENST00000568699 1129 ntBASIC12.45□□□□□ -0.42
CD28P10747 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 AC099568.2-201ENST00000609194 695 ntBASIC12.45□□□□□ -0.42
CD28P10747 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 AL592424.1-201ENST00000563624 1536 ntBASIC12.45□□□□□ -0.42
CD28P10747 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 AC005052.1-201ENST00000625181 2492 ntBASIC12.45□□□□□ -0.42
CD28P10747 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.45□□□□□ -0.42
CD28P10747 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CD28P10747 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CD28P10747 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CD28P10747 AC004987.2-201ENST00000395959 1148 ntBASIC12.44□□□□□ -0.42
CD28P10747 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CD28P10747 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.44□□□□□ -0.42
CD28P10747 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.44□□□□□ -0.42
CD28P10747 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.44□□□□□ -0.42
CD28P10747 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 CLK3P2-201ENST00000427566 1453 ntBASIC12.44□□□□□ -0.42
CD28P10747 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.44□□□□□ -0.42
CD28P10747 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD28P10747 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD28P10747 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD28P10747 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms