Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC107373.2-201ENST00000607735 490 ntBASIC16.35■□□□□ 0.21
RHOP08100 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.35■□□□□ 0.21
RHOP08100 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RHOP08100 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 AL133267.1-201ENST00000398220 340 ntBASIC16.34■□□□□ 0.21
RHOP08100 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.34■□□□□ 0.21
RHOP08100 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 YBX1P6-201ENST00000442962 1002 ntBASIC16.34■□□□□ 0.21
RHOP08100 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.34■□□□□ 0.21
RHOP08100 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.34■□□□□ 0.21
RHOP08100 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 AC079316.1-201ENST00000548397 411 ntBASIC16.34■□□□□ 0.21
RHOP08100 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 MIR6787-201ENST00000616675 61 ntBASIC16.34■□□□□ 0.21
RHOP08100 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RHOP08100 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.34■□□□□ 0.21
RHOP08100 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RHOP08100 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RHOP08100 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.33■□□□□ 0.21
RHOP08100 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.21
RHOP08100 AC011477.6-201ENST00000604980 1927 ntBASIC16.33■□□□□ 0.21
RHOP08100 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RHOP08100 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RHOP08100 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.33■□□□□ 0.2
RHOP08100 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.33■□□□□ 0.2
RHOP08100 AC026954.1-201ENST00000429771 1293 ntBASIC16.33■□□□□ 0.2
RHOP08100 C2orf27AP3-201ENST00000434123 579 ntBASIC16.33■□□□□ 0.2
RHOP08100 AP001582.1-201ENST00000525856 295 ntBASIC16.33■□□□□ 0.2
RHOP08100 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.33■□□□□ 0.2
RHOP08100 AC015910.1-201ENST00000579400 975 ntBASIC16.33■□□□□ 0.2
RHOP08100 GNRHR2-203ENST00000581100 1187 ntBASIC16.33■□□□□ 0.2
RHOP08100 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.33■□□□□ 0.2
RHOP08100 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 AL354718.3-201ENST00000616414 581 ntBASIC16.33■□□□□ 0.2
RHOP08100 CR382287.1-201ENST00000623954 586 ntBASIC16.33■□□□□ 0.2
RHOP08100 RHOXF1P1-202ENST00000635473 501 ntBASIC16.33■□□□□ 0.2
RHOP08100 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RHOP08100 KRT8P44-201ENST00000441609 1350 ntBASIC16.33■□□□□ 0.2
RHOP08100 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
RHOP08100 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.33■□□□□ 0.2
RHOP08100 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.33■□□□□ 0.2
RHOP08100 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RHOP08100 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHOP08100 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms