Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MT-ND1P03886 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
MT-ND1P03886 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.08■□□□□ 0
MT-ND1P03886 AC012640.2-201ENST00000561606 901 ntBASIC15.08■□□□□ 0
MT-ND1P03886 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.08■□□□□ 0
MT-ND1P03886 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.08■□□□□ 0
MT-ND1P03886 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.08■□□□□ 0
MT-ND1P03886 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.08■□□□□ 0
MT-ND1P03886 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MT-ND1P03886 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MT-ND1P03886 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
MT-ND1P03886 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.07■□□□□ 0
MT-ND1P03886 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.07■□□□□ 0
MT-ND1P03886 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 AC134407.2-201ENST00000625089 1978 ntBASIC15.07■□□□□ 0
MT-ND1P03886 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
MT-ND1P03886 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
MT-ND1P03886 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.07■□□□□ 0
MT-ND1P03886 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 AGAP7P-201ENST00000582299 2062 ntBASIC15.06■□□□□ 0
MT-ND1P03886 AGAP14-201ENST00000624701 2060 ntBASIC15.06■□□□□ 0
MT-ND1P03886 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MT-ND1P03886 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.06■□□□□ 0
MT-ND1P03886 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.06■□□□□ 0
MT-ND1P03886 AC108073.2-201ENST00000464002 357 ntBASIC15.06■□□□□ 0
MT-ND1P03886 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MT-ND1P03886 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.06■□□□□ 0
MT-ND1P03886 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.06■□□□□ 0
MT-ND1P03886 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.06■□□□□ 0
MT-ND1P03886 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms