Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLSTN1O94985 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLSTN1O94985 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLSTN1O94985 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.72■□□□□ 0.43
CLSTN1O94985 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.72■□□□□ 0.43
CLSTN1O94985 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.72■□□□□ 0.43
CLSTN1O94985 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.72■□□□□ 0.43
CLSTN1O94985 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLSTN1O94985 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLSTN1O94985 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 ME2P1-201ENST00000426028 1970 ntBASIC17.71■□□□□ 0.43
CLSTN1O94985 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
CLSTN1O94985 KRT18P32-201ENST00000424695 1287 ntBASIC17.71■□□□□ 0.43
CLSTN1O94985 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.71■□□□□ 0.43
CLSTN1O94985 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLSTN1O94985 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLSTN1O94985 REXO1L8P-201ENST00000604378 1897 ntBASIC17.71■□□□□ 0.43
CLSTN1O94985 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLSTN1O94985 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLSTN1O94985 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLSTN1O94985 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CLSTN1O94985 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.71■□□□□ 0.42
CLSTN1O94985 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLSTN1O94985 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.7■□□□□ 0.42
CLSTN1O94985 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.7■□□□□ 0.42
CLSTN1O94985 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.7■□□□□ 0.42
CLSTN1O94985 AC055717.3-201ENST00000622967 595 ntBASIC17.7■□□□□ 0.42
CLSTN1O94985 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.7■□□□□ 0.42
CLSTN1O94985 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC17.7■□□□□ 0.42
CLSTN1O94985 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLSTN1O94985 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms