Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.88□□□□□ -0.19
UPK1BO75841 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 AC005336.2-201ENST00000593183 939 ntBASIC13.88□□□□□ -0.19
UPK1BO75841 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UPK1BO75841 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 AL590787.1-201ENST00000568856 1315 ntBASIC13.88□□□□□ -0.19
UPK1BO75841 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UPK1BO75841 AC127383.1-201ENST00000444697 1800 ntBASIC13.87□□□□□ -0.19
UPK1BO75841 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 NUTM2HP-201ENST00000442076 2498 ntBASIC13.87□□□□□ -0.19
UPK1BO75841 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.87□□□□□ -0.19
UPK1BO75841 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.87□□□□□ -0.19
UPK1BO75841 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 AL390719.2-201ENST00000606993 987 ntBASIC13.87□□□□□ -0.19
UPK1BO75841 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.87□□□□□ -0.19
UPK1BO75841 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK1BO75841 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
UPK1BO75841 AC118758.2-201ENST00000614242 2813 ntBASIC13.87□□□□□ -0.19
UPK1BO75841 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.87□□□□□ -0.19
UPK1BO75841 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
UPK1BO75841 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK1BO75841 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK1BO75841 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 AC079776.2-201ENST00000641154 1609 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK1BO75841 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK1BO75841 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms