Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
KDELR3O43731 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KDELR3O43731 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
KDELR3O43731 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KDELR3O43731 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.07■□□□□ 0.16
KDELR3O43731 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KDELR3O43731 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KDELR3O43731 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 AC138969.3-201ENST00000546612 1459 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 AC138932.2-201ENST00000548268 1459 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 AC126755.4-201ENST00000549796 1459 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KDELR3O43731 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.06■□□□□ 0.16
KDELR3O43731 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.06■□□□□ 0.16
KDELR3O43731 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.06■□□□□ 0.16
KDELR3O43731 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.06■□□□□ 0.16
KDELR3O43731 TPRX2P-201ENST00000535362 881 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
KDELR3O43731 AC023310.3-201ENST00000557027 670 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 AC100756.1-201ENST00000562736 682 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 AC138749.3-201ENST00000567691 622 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.06■□□□□ 0.16
KDELR3O43731 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 AC116165.1-201ENST00000611806 668 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.06■□□□□ 0.16
KDELR3O43731 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.06■□□□□ 0.16
KDELR3O43731 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDELR3O43731 PRAL-201ENST00000624952 3286 ntBASIC16.06■□□□□ 0.16
KDELR3O43731 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KDELR3O43731 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
KDELR3O43731 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.05■□□□□ 0.16
KDELR3O43731 PIN1P1-201ENST00000412108 996 ntBASIC16.05■□□□□ 0.16
KDELR3O43731 MEP1AP4-201ENST00000423244 1087 ntBASIC16.05■□□□□ 0.16
KDELR3O43731 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 AC093004.1-201ENST00000508850 424 ntBASIC16.05■□□□□ 0.16
KDELR3O43731 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.05■□□□□ 0.16
KDELR3O43731 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KDELR3O43731 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
KDELR3O43731 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.05■□□□□ 0.16
KDELR3O43731 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDELR3O43731 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 AC007541.1-201ENST00000570282 1469 ntBASIC16.04■□□□□ 0.16
KDELR3O43731 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms