Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ3O43525 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ3O43525 KRT43P-201ENST00000434019 910 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 AC012441.1-201ENST00000446669 685 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 KLF2P4-201ENST00000451959 1225 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 RPL13AP25-201ENST00000484130 612 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 AC092658.1-201ENST00000505836 891 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.19■□□□□ 0.82
KCNQ3O43525 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 AL583810.1-201ENST00000553344 1045 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ3O43525 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 BOLA2P3-201ENST00000404566 256 ntBASIC20.18■□□□□ 0.82
KCNQ3O43525 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 AC022494.1-201ENST00000466044 728 ntBASIC20.18■□□□□ 0.82
KCNQ3O43525 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 MIR4538-201ENST00000581377 78 ntBASIC20.18■□□□□ 0.82
KCNQ3O43525 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNQ3O43525 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ3O43525 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
KCNQ3O43525 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ3O43525 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.17■□□□□ 0.82
KCNQ3O43525 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.17■□□□□ 0.82
KCNQ3O43525 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.17■□□□□ 0.82
KCNQ3O43525 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KCNQ3O43525 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KCNQ3O43525 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 FAM86MP-201ENST00000340703 885 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 AL133267.1-201ENST00000398220 340 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.17■□□□□ 0.82
KCNQ3O43525 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 CSF2RBP1-201ENST00000447905 391 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 AC007551.1-201ENST00000457394 519 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
KCNQ3O43525 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms