Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RIPK2O43353 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
RIPK2O43353 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 IGLL3P-201ENST00000412472 434 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.18■□□□□ 0.18
RIPK2O43353 AC018712.1-201ENST00000455767 687 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.18■□□□□ 0.18
RIPK2O43353 PRYP6-201ENST00000514804 343 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 PRELID1P1-202ENST00000567272 903 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.18■□□□□ 0.18
RIPK2O43353 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.18■□□□□ 0.18
RIPK2O43353 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.18■□□□□ 0.18
RIPK2O43353 LINC01711-201ENST00000598340 967 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 TP73-AS1-207ENST00000624167 988 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 ZBED1P1-201ENST00000502364 1930 ntBASIC16.17■□□□□ 0.18
RIPK2O43353 NFIC-211ENST00000641145 8399 ntBASIC16.17■□□□□ 0.18
RIPK2O43353 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RIPK2O43353 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RIPK2O43353 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.17■□□□□ 0.18
RIPK2O43353 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.17■□□□□ 0.18
RIPK2O43353 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 AL645939.2-201ENST00000427340 991 ntBASIC16.17■□□□□ 0.18
RIPK2O43353 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
RIPK2O43353 HCG4P8-203ENST00000443049 980 ntBASIC16.17■□□□□ 0.18
RIPK2O43353 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.17■□□□□ 0.18
RIPK2O43353 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.17■□□□□ 0.18
RIPK2O43353 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RIPK2O43353 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RIPK2O43353 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RIPK2O43353 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
RIPK2O43353 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.16■□□□□ 0.18
RIPK2O43353 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RIPK2O43353 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.16■□□□□ 0.18
RIPK2O43353 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RIPK2O43353 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
RIPK2O43353 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.16■□□□□ 0.18
RIPK2O43353 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIPK2O43353 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
RIPK2O43353 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.15■□□□□ 0.18
RIPK2O43353 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIPK2O43353 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.15■□□□□ 0.18
RIPK2O43353 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.15■□□□□ 0.18
RIPK2O43353 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms