Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC18O15417 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC18O15417 AC018892.3-201ENST00000623986 2499 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 PCGF3-213ENST00000620529 1899 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNRC18O15417 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNRC18O15417 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
TNRC18O15417 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.71■□□□□ 0.26
TNRC18O15417 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.71■□□□□ 0.26
TNRC18O15417 EIF3FP3-201ENST00000434851 1086 ntBASIC16.71■□□□□ 0.26
TNRC18O15417 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.71■□□□□ 0.26
TNRC18O15417 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.71■□□□□ 0.26
TNRC18O15417 AC080013.5-201ENST00000607044 679 ntBASIC16.71■□□□□ 0.26
TNRC18O15417 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TNRC18O15417 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC18O15417 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC18O15417 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.7■□□□□ 0.26
TNRC18O15417 AC063952.3-201ENST00000467756 308 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 RN7SL81P-201ENST00000493781 261 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.7■□□□□ 0.26
TNRC18O15417 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.7■□□□□ 0.26
TNRC18O15417 AC020904.3-201ENST00000624199 442 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.7■□□□□ 0.26
TNRC18O15417 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.7■□□□□ 0.26
TNRC18O15417 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.7■□□□□ 0.26
TNRC18O15417 AC008805.1-201ENST00000590892 364 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 AC097359.3-201ENST00000603982 1210 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 LINC01815-202ENST00000641468 1409 ntBASIC16.7■□□□□ 0.26
TNRC18O15417 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNRC18O15417 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNRC18O15417 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.69■□□□□ 0.26
TNRC18O15417 AC021321.1-201ENST00000607397 1113 ntBASIC16.69■□□□□ 0.26
TNRC18O15417 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.69■□□□□ 0.26
TNRC18O15417 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNRC18O15417 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 NHP2P1-201ENST00000335274 462 ntBASIC16.69■□□□□ 0.26
TNRC18O15417 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.69■□□□□ 0.26
TNRC18O15417 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.69■□□□□ 0.26
TNRC18O15417 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TNRC18O15417 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.69■□□□□ 0.26
TNRC18O15417 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.69■□□□□ 0.26
TNRC18O15417 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNRC18O15417 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
TNRC18O15417 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.68■□□□□ 0.26
TNRC18O15417 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 HLA-DMA-203ENST00000395305 777 ntBASIC16.68■□□□□ 0.26
TNRC18O15417 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.68■□□□□ 0.26
TNRC18O15417 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC16.68■□□□□ 0.26
TNRC18O15417 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.68■□□□□ 0.26
TNRC18O15417 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNRC18O15417 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.68■□□□□ 0.26
TNRC18O15417 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.68■□□□□ 0.26
TNRC18O15417 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 LRRC59-203ENST00000576448 1531 ntBASIC16.68■□□□□ 0.26
TNRC18O15417 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNRC18O15417 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TNRC18O15417 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms