Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 RBPMS2P1-201ENST00000437762 623 ntBASIC15.63■□□□□ 0.09
CDC7O00311 PHKG1P2-201ENST00000457537 863 ntBASIC15.63■□□□□ 0.09
CDC7O00311 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDC7O00311 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.63■□□□□ 0.09
CDC7O00311 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 MST1L-201ENST00000442552 2185 ntBASIC15.63■□□□□ 0.09
CDC7O00311 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC7O00311 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC7O00311 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC7O00311 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 AL513477.1-201ENST00000602865 2407 ntBASIC15.62■□□□□ 0.09
CDC7O00311 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 AC103702.1-201ENST00000548801 2630 ntBASIC15.62■□□□□ 0.09
CDC7O00311 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDC7O00311 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.62■□□□□ 0.09
CDC7O00311 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 EEF1DP4-201ENST00000446006 880 ntBASIC15.62■□□□□ 0.09
CDC7O00311 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.62■□□□□ 0.09
CDC7O00311 AP000344.2-201ENST00000512987 629 ntBASIC15.62■□□□□ 0.09
CDC7O00311 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.62■□□□□ 0.09
CDC7O00311 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC7O00311 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.62■□□□□ 0.09
CDC7O00311 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC7O00311 AC018529.1-201ENST00000613063 361 ntBASIC15.62■□□□□ 0.09
CDC7O00311 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC7O00311 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDC7O00311 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC7O00311 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC7O00311 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDC7O00311 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 SPDYE14P-201ENST00000442619 822 ntBASIC15.61■□□□□ 0.09
CDC7O00311 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.61■□□□□ 0.09
CDC7O00311 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
CDC7O00311 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDC7O00311 AC105021.1-202ENST00000570572 669 ntBASIC15.61■□□□□ 0.09
CDC7O00311 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
CDC7O00311 AC004835.2-201ENST00000603762 682 ntBASIC15.61■□□□□ 0.09
CDC7O00311 AC003101.2-201ENST00000612557 442 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms