Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3BA6NDS4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 ACTG1P3-201ENST00000431775 1114 ntBASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AC233724.13-201ENST00000598383 410 ntBASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 AC018665.1-201ENST00000622927 1362 ntBASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TBC1D3BA6NDS4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3BA6NDS4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 KRT223P-202ENST00000449164 1292 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 USP32P1-208ENST00000506594 1164 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 AC104989.1-201ENST00000519711 778 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 ENPP7P5-201ENST00000541031 1031 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 HNRNPUP1-201ENST00000554987 333 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 MIR4259-201ENST00000584466 101 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 COX11-210ENST00000639671 696 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 PCDHA12-202ENST00000613593 2588 ntBASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms