Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPDC1A2A3K4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AC022144.1-201ENST00000602255 1580 ntBASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 AC073347.1-201ENST00000421633 2643 ntBASIC18.7■□□□□ 0.58
PTPDC1A2A3K4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 RPL37AP1-201ENST00000412502 279 ntBASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TEX28P1-201ENST00000613479 1221 ntBASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TEX28P2-201ENST00000617764 1221 ntBASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTPDC1A2A3K4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.68■□□□□ 0.58
PTPDC1A2A3K4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms