Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-3A0A0A0MS03 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV5-3A0A0A0MS03 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV5-3A0A0A0MS03 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV5-3A0A0A0MS03 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AZGP1P1-201ENST00000411909 902 ntBASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 RNA5SP416-201ENST00000516838 111 ntBASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRBV5-3A0A0A0MS03 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC026748.1-201ENST00000624349 3251 ntBASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 KRT8P48-201ENST00000515599 1220 ntBASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC140113.2-201ENST00000604370 208 ntBASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRBV5-3A0A0A0MS03 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms