Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 LINC02199-201ENST00000506655 2702 ntBASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LINC01115-203ENST00000606068 577 ntBASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1G3Q9Y6M4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 CDC14C-201ENST00000428251 1719 ntBASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 AP001282.1-201ENST00000531301 1499 ntBASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 HLA-V-201ENST00000429037 534 ntBASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 AL442647.2-201ENST00000429864 857 ntBASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1G3Q9Y6M4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1G3Q9Y6M4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms