Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AC240504.1-201ENST00000395709 845 ntBASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 BANF1P1-201ENST00000553684 263 ntBASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 RPAP2P1-201ENST00000603626 1168 ntBASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 CNN2P2-201ENST00000443536 909 ntBASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 CNN2P3-201ENST00000450201 906 ntBASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AL136317.3-201ENST00000618497 906 ntBASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 KRT18P28-201ENST00000453838 1332 ntBASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB13Q9Y5F0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms