Protein–RNA interactions for Protein: Q9Y2D1

ATF5, Cyclic AMP-dependent transcription factor ATF-5, humanhuman

Predicted RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF5Q9Y2D1 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC004987.2-201ENST00000395959 1148 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AP001981.1-201ENST00000531132 738 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC097376.1-201ENST00000602907 997 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC073352.2-201ENST00000609385 439 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC011491.1-203ENST00000637688 543 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 AC008132.1-202ENST00000342005 1389 ntBASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
ATF5Q9Y2D1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF5Q9Y2D1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SERPINA13P-202ENST00000478994 924 ntBASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 AC124947.2-201ENST00000547118 1133 ntBASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 AC092068.3-201ENST00000587894 2016 ntBASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 LINC02012-201ENST00000608206 1725 ntBASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF5Q9Y2D1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AC005622.1-201ENST00000636801 1703 ntBASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 AC026410.3-201ENST00000514280 936 ntBASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 PGAM1P5-201ENST00000548011 764 ntBASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF5Q9Y2D1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms