Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AL355864.2-201ENST00000447420 863 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AC119751.2-201ENST00000504529 210 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AP005019.2-201ENST00000615104 511 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AL138799.1-201ENST00000448213 1675 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AL662844.4-201ENST00000606367 2838 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 MIR658-201ENST00000385210 100 ntBASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AP000812.2-201ENST00000538934 718 ntBASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 COX11-210ENST00000639671 696 ntBASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPO2Q9UMS6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AL513523.2-202ENST00000427283 2040 ntBASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AC104989.1-201ENST00000519711 778 ntBASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 AC025181.2-201ENST00000606994 802 ntBASIC18.1■□□□□ 0.49
SYNPO2Q9UMS6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms