Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.76■□□□□ 0.27
CDH9Q9ULB4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH9Q9ULB4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 AL391005.1-201ENST00000623953 2435 ntBASIC16.75■□□□□ 0.27
CDH9Q9ULB4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 AC123567.1-201ENST00000548294 1261 ntBASIC16.75■□□□□ 0.27
CDH9Q9ULB4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 AC008494.3-201ENST00000606615 944 ntBASIC16.75■□□□□ 0.27
CDH9Q9ULB4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH9Q9ULB4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC018695.7-201ENST00000624587 2492 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 MYCLP2-201ENST00000449268 967 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 RN7SL692P-201ENST00000464677 288 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 RN7SL399P-201ENST00000471648 279 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AL596325.1-201ENST00000563991 1082 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC036164.1-201ENST00000570544 333 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 AC026691.1-201ENST00000602502 2017 ntBASIC16.74■□□□□ 0.27
CDH9Q9ULB4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH9Q9ULB4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 DGCR5-201ENST00000399539 862 ntBASIC16.73■□□□□ 0.27
CDH9Q9ULB4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 AC104596.2-201ENST00000512793 793 ntBASIC16.73■□□□□ 0.27
CDH9Q9ULB4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 AC012645.4-201ENST00000610691 1061 ntBASIC16.73■□□□□ 0.27
CDH9Q9ULB4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH9Q9ULB4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms