Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN11AQ9UI33 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN11AQ9UI33 AP006547.1-201ENST00000563435 692 ntBASIC20.02■□□□□ 0.8
SCN11AQ9UI33 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN11AQ9UI33 MIR4741-201ENST00000579822 90 ntBASIC20.02■□□□□ 0.8
SCN11AQ9UI33 AL096828.3-201ENST00000615354 462 ntBASIC20.02■□□□□ 0.8
SCN11AQ9UI33 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SCN11AQ9UI33 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN11AQ9UI33 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN11AQ9UI33 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SCN11AQ9UI33 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN11AQ9UI33 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SCN11AQ9UI33 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 RPSAP36-202ENST00000494591 1261 ntBASIC20.01■□□□□ 0.79
SCN11AQ9UI33 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 LRRC59-203ENST00000576448 1531 ntBASIC20.01■□□□□ 0.79
SCN11AQ9UI33 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SCN11AQ9UI33 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20■□□□□ 0.79
SCN11AQ9UI33 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20■□□□□ 0.79
SCN11AQ9UI33 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 MIR3615-201ENST00000581999 87 ntBASIC20■□□□□ 0.79
SCN11AQ9UI33 AC132938.4-201ENST00000623835 848 ntBASIC20■□□□□ 0.79
SCN11AQ9UI33 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20■□□□□ 0.79
SCN11AQ9UI33 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 AC020916.1-201ENST00000587762 1774 ntBASIC20■□□□□ 0.79
SCN11AQ9UI33 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN11AQ9UI33 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20■□□□□ 0.79
SCN11AQ9UI33 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 AL591846.1-201ENST00000451736 433 ntBASIC20■□□□□ 0.79
SCN11AQ9UI33 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20■□□□□ 0.79
SCN11AQ9UI33 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20■□□□□ 0.79
SCN11AQ9UI33 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20■□□□□ 0.79
SCN11AQ9UI33 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20■□□□□ 0.79
SCN11AQ9UI33 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCN11AQ9UI33 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN11AQ9UI33 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 AC026471.1-201ENST00000564629 3026 ntBASIC19.99■□□□□ 0.79
SCN11AQ9UI33 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 AL645937.2-201ENST00000396808 931 ntBASIC19.99■□□□□ 0.79
SCN11AQ9UI33 AC079178.1-201ENST00000420915 656 ntBASIC19.99■□□□□ 0.79
SCN11AQ9UI33 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN11AQ9UI33 HLA-K-203ENST00000430151 1046 ntBASIC19.99■□□□□ 0.79
SCN11AQ9UI33 CALR4P-201ENST00000431943 946 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms