Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MTND2P28-201ENST00000457540 1044 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 LINC02515-201ENST00000503677 536 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 BEAN1-AS1-203ENST00000569125 530 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC095055.1-201ENST00000603472 1113 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC105129.3-201ENST00000605455 485 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 GGTLC5P-201ENST00000617623 998 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AL355493.4-201ENST00000618530 292 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC055717.3-201ENST00000622967 595 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC132938.5-201ENST00000624980 1813 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AC018717.1-201ENST00000457712 1505 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC073544.1-201ENST00000600110 1595 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 MTCYBP35-201ENST00000503630 1137 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LAMTOR3P2-201ENST00000504479 232 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 STK19B-204ENST00000512515 211 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 Y_RNA.688-201ENST00000516565 95 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC005829.1-201ENST00000570002 483 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AL118558.3-201ENST00000607414 1079 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AL157770.1-201ENST00000623049 439 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AL121594.5-201ENST00000631724 573 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 KRT18P55-202ENST00000578578 1546 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 AC004817.3-201ENST00000602957 2129 ntBASIC19.03■□□□□ 0.64
RNF216Q9NWF9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF216Q9NWF9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF216Q9NWF9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms