Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 AC087481.3-201ENST00000602886 1894 ntBASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 BX842568.4-201ENST00000421222 227 ntBASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 AC112191.1-201ENST00000523689 701 ntBASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 YBX2P1-201ENST00000394192 760 ntBASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AC002056.1-201ENST00000395613 760 ntBASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AC093724.1-201ENST00000448659 1027 ntBASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AC109635.5-201ENST00000533593 962 ntBASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.29□□□□□ -0.28
LIN7CQ9NUP9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms